AT1G04870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein arginine methyltransferase 10 | ||||||||||||
| Curator Summary (TAIR10) |
Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. | ||||||||||||
| Computational Description (TAIR10) |
protein arginine methyltransferase 10 (PRMT10); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 6 (TAIR:AT3G20020.1); Has 1641 Blast hits to 1634 proteins in 326 species: Archae - 0; Bacteria - 17; Metazoa - 883; Fungi - 244; Plants - 262; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:1373485..1375128 | ||||||||||||
| Molecular Weight (calculated) | 32076.00 Da | ||||||||||||
| IEP (calculated) | 4.57 | ||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||
| Length | 280 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADHARALVK ANNLDHIVEV IEGSVEDISL PEKVDVIISE WMGYFLLRES MFDSVISARD RWLKPTGVMY PSHARMWLAP IKSNIADRKR NDFDGAMADW 101: HNFSDEIKSY YGVDMGVLTK PFAEEQEKYY IQTAMWNDLN PQQIIGTPTI VKEMDCLTAS VSEIEEVRSN VTSVINMEHT RLCGFGGWFD VQFSGRKEDP 201: AQQEIELTTA PSEQHCTHWG QQVFIMSNPI NVEEGDNLNL GLLMSRSKEN HRLMEIELNC EIKEASGNPK ESFKKTYFIE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)