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AT1G04380.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 0.942
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
encodes a protein similar to a 2-oxoglutarate-dependent dioxygenase
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: 2-oxoglutarate-dependent dioxygenase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G04350.1); Has 8121 Blast hits to 8082 proteins in 999 species: Archae - 0; Bacteria - 1115; Metazoa - 117; Fungi - 760; Plants - 4878; Viruses - 0; Other Eukaryotes - 1251 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G04380-MONOMEREC:1.14.-.-eggNOG:COG3491eggNOG:KOG0143EMBL:AC000104EMBL:AK228520EMBL:CP002684
EnsemblPlants:AT1G04380EnsemblPlants:AT1G04380.1entrez:839535Gene3D:2.60.120.330GeneID:839535Genevisible:P93821GO:GO:0016491
GO:GO:0046872Gramene:AT1G04380.1hmmpanther:PTHR10209hmmpanther:PTHR10209:SF122HOGENOM:HOG000276735InParanoid:P93821InterPro:IPR005123
InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT1G04380OMA:HMICHYYPaxDb:P93821Pfam:P93821Pfam:PF03171
Pfam:PF14226Pfscan:PS51471PhylomeDB:P93821PIR:E86175PRIDE:P93821PRO:PR:P93821PROSITE:PS51471
ProteinModelPortal:P93821Proteomes:UP000006548RefSeq:NP_171933.1SMR:P93821SUPFAM:SSF51197TAIR:AT1G04380UniGene:At.43795
UniProt:P93821
Coordinates (TAIR10) chr1:-:1177142..1178384
Molecular Weight (calculated) 38620.10 Da
IEP (calculated) 5.55
GRAVY (calculated) -0.23
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MVVKNSIKFN SQSERKSLEE TKVPPIFGLP PDALDDKKPT SDFAVPIIDF AGVHKSREAV VEKIKAAAEN WGIFQVINHG VPLSVLEEIQ NGVVRFHEED
101: PEVKKSYFSL DLTKTFIYHN NFELYSSSAG NWRDSFVCYM DPDPSNPEDL PVACRDAMIG YSKHVMSLGG LLFELLSEAL GLNSDTLKSM GCMKGLHMIC
201: HYYPPCPQPD QTLGTSKHSD NTFITILLQD NIGGLQILHQ DCWVDVSPLP GALIINIGDF LQLMTNDKFI SVDHRVLTNR VGPRISIACF FSSSMNPNST
301: VYGPIKELLS EENPPKYRDF TIPEYSKGYI EKGLDGTSHL SHYRI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)