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AT1G04330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.926
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSCZeggNOG:ENOG41108XAEMBL:AC000104EMBL:BT010663EMBL:BT010954EMBL:CP002684EnsemblPlants:AT1G04330
EnsemblPlants:AT1G04330.1entrez:839548GeneID:839548Gramene:AT1G04330.1hmmpanther:PTHR33912hmmpanther:PTHR33912:SF2HOGENOM:HOG000029082
IntAct:O22691KEGG:ath:AT1G04330OMA:EQRWGKEPhylomeDB:O22691PIR:G86174Proteomes:UP000006548RefSeq:NP_171928.1
STRING:3702.AT1G04330.1TAIR:AT1G04330UniGene:At.42459UniProt:O22691
Coordinates (TAIR10) chr1:-:1161584..1161886
Molecular Weight (calculated) 11301.50 Da
IEP (calculated) 11.09
GRAVY (calculated) -1.04
Length 100 amino acids
Sequence (TAIR10)
(BLAST)
1: MSSTARNISG SGNRKSSRLQ RRAPPPLKIN PCEANWKVAI PLLSPTESPP QKPPAVMKRE EQRWGKEAEK PPVFKKWQHP AAPFYYQPAP SSNQPFAWPN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)