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AT1G04150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 3504 Blast hits to 2915 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 2158; Fungi - 82; Plants - 979; Viruses - 2; Other Eukaryotes - 281 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IH0ReggNOG:ENOG410YDADEMBL:AC002411EMBL:CP002684EnsemblPlants:AT1G04150EnsemblPlants:AT1G04150.1entrez:839249
Gene3D:2.60.40.150GeneID:839249GO:GO:0016021GO:GO:0016757Gramene:AT1G04150.1hmmpanther:PTHR10024hmmpanther:PTHR10024:SF253
HOGENOM:HOG000238008InterPro:IPR000008InterPro:IPR013583KEGG:ath:AT1G04150OMA:LESARNWPfam:PF00168Pfam:PF08372
Pfscan:PS50004PhylomeDB:O64492PIR:T00958PROSITE:PS50004Proteomes:UP000006548RefSeq:NP_171911.1SMART:SM00239
SMR:O64492SUPFAM:SSF49562TAIR:AT1G04150TMHMM:TMhelixUniGene:At.65884UniProt:O64492
Coordinates (TAIR10) chr1:-:1081208..1084246
Molecular Weight (calculated) 113940.00 Da
IEP (calculated) 9.92
GRAVY (calculated) -0.29
Length 1012 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTEAKTGTGN ERLVVEIVGA HNLMPKDGED SSSPFVEVQF ENQRLRTKVK PKDLNPIWNE KLVFHVIDVN DLRHKALEIN VYNEKRSSNS RNFLGKVRVL
0101: GSSVGREGES VVQLYTLEKR SLFSSVRGEI SVKHYMTTTA ENGENVRRVN RSGGSKKSKK VQNVSSSMAI QQQQQQQQQQ ISLHNHNRGN QQQSQQNGQG
0201: QRMLPFYPHQ SEIKPLVITA LPSPMPGPGP RPIVYSNGSS EFSLKETKPC LGGTSNGLGG LSSHKDKTSS TYDLVEQMQY LYVNIVKAKD LSVLGEVVSE
0301: VKLGNYRGVT KKVSSNSSNP EWNQVFVFSK ERIQSSVVEL FVKEGNKDEY TGRVLFDLSE IPTRVPPDSP LAPQWYKIEN RNGGRGNGEL MVSVWFGTQA
0401: DEAFAEAWHS KAGNVHIEEL SSIKSKVYLS PKLWYLRISV IEAQDVAIMD KGSSLMRFPE LSAKLQVGSQ ILRTAIASAI PTKSFSNPYW NEDLMFVVAE
0501: PFEDCVTVVV EDRLNGGAIG GQNDVAVGRV QIPISAVERR TGDTLVGSRW FSLDNGNNNN RFGSRIHLRL SLDGGYHVLD EATMYNSDVR PTAKELWKPQ
0601: VGLLEIGILS ATGLMPMKVR DGKCGGIADS YCVAKYGPKW VRTRTVVDSL CPKWNEQYTW EVYDPCTVVT VGVFDNARVN ENNNSRDVRI GKVRIRLSTL
0701: ETGRVYTHSY PLIVLHPSGV KKTGELHLAV RLSCGNAVNM LHMYALPLLP KMHYTQPLGV HMLERLRYQT LNAVAARLSR AEPPLGREVV EYMLDHDFHV
0801: WSMRRSKANF FRLVNVISGL VAVAKLVEVM RSWSKPVYST VFVLAFLFMV LFPELLLPCL LLYTAAVGVW RFRRRSRYPP HMDARISHAE TVFPDELDEE
0901: FDTFPTSRGF DVVRMRYDRV RSIAGRVQTV VGDMASQGER VQALLSWRDP RATFLFLMFC LLAAVGFYTV PVKLTVAISG LYYLRPPRFR RKLPSRGLSF
1001: FRRLPSRADS LL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)