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AT1G03050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ENTH/ANTH/VHS superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G02650.1); Has 1509 Blast hits to 1324 proteins in 217 species: Archae - 4; Bacteria - 48; Metazoa - 522; Fungi - 214; Plants - 422; Viruses - 12; Other Eukaryotes - 287 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ90eggNOG:KOG0251EMBL:AC006550EMBL:CP002684EMBL:DQ446223EnsemblPlants:AT1G03050EnsemblPlants:AT1G03050.1
entrez:839416Gene3D:1.20.58.150Gene3D:1.25.40.90GeneID:839416Genevisible:Q9SA65GO:GO:0005545GO:GO:0005794
GO:GO:0005905GO:GO:0006897GO:GO:0030136GO:GO:0048268Gramene:AT1G03050.1hmmpanther:PTHR22951hmmpanther:PTHR22951:SF12
HOGENOM:HOG000238534InParanoid:Q9SA65InterPro:IPR008942InterPro:IPR011417InterPro:IPR013809InterPro:IPR014712KEGG:ath:AT1G03050
OMA:TWCKDAYPaxDb:Q9SA65Pfam:PF07651Pfam:Q9SA65Pfscan:PS50942PhylomeDB:Q9SA65PIR:C86161
PRIDE:Q9SA65PRO:PR:Q9SA65PROSITE:PS50942ProteinModelPortal:Q9SA65Proteomes:UP000006548RefSeq:NP_171804.1SMART:SM00273
SMR:Q9SA65STRING:3702.AT1G03050.1SUPFAM:SSF48464SUPFAM:SSF89009TAIR:AT1G03050UniGene:At.42563UniGene:At.51465
UniProt:Q9SA65
Coordinates (TAIR10) chr1:+:707726..709860
Molecular Weight (calculated) 66974.80 Da
IEP (calculated) 4.57
GRAVY (calculated) -0.52
Length 599 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)