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AT1G02810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02330.1); Has 2709 Blast hits to 2654 proteins in 327 species: Archae - 6; Bacteria - 603; Metazoa - 3; Fungi - 204; Plants - 1867; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G02810-MONOMEREC:3.1.1.11eggNOG:COG4677eggNOG:ENOG410IFP7
EMBL:AC009525EMBL:AK228966EMBL:BT030371EMBL:CP002684
EnsemblPlants:AT1G02810EnsemblPlants:AT1G02810.1entrez:838078Gene3D:1.20.140.40
Gene3D:2.160.20.10GeneID:838078Genevisible:Q9SRX4GO:GO:0004857
GO:GO:0005576GO:GO:0005618GO:GO:0030599GO:GO:0042545
GO:GO:0045330GO:GO:0045490Gramene:AT1G02810.1gramene_pathway:3.1.1.11
gramene_pathway:PWY-1081hmmpanther:PTHR31707hmmpanther:PTHR31707:SF38HOGENOM:HOG000217409
InParanoid:Q9SRX4InterPro:IPR000070InterPro:IPR006501InterPro:IPR011050
InterPro:IPR012334InterPro:IPR033131KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11
KEGG:ath:AT1G02810KO:K01051OMA:STHTKPFPaxDb:Q9SRX4
Pfam:PF01095Pfam:PF04043Pfam:Q9SRX4PhylomeDB:Q9SRX4
PIR:B86158PRIDE:Q9SRX4PRO:PR:Q9SRX4PROSITE:PS00503
ProteinModelPortal:Q9SRX4Proteomes:UP000006548RefSeq:NP_563662.1scanprosite:PS00503
SMART:SM00856SMR:Q9SRX4STRING:3702.AT1G02810.1SUPFAM:SSF101148
SUPFAM:SSF51126TAIR:AT1G02810UniGene:At.42579UniPathway:UPA00545
UniProt:Q9SRX4
Coordinates (TAIR10) chr1:+:618284..620333
Molecular Weight (calculated) 63955.50 Da
IEP (calculated) 8.90
GRAVY (calculated) -0.21
Length 579 amino acids
Sequence (TAIR10)
(BLAST)
001: MESPIFILIT LSFFLQSVLA SSQTLSNSST ICKTTPDPKY CKSVFPHSQG NVQQYGCFSI RKSLSQSRKF IRTVDRYIKR NAHLSQPAVI RALQDCRFLA
101: GLTMDYLLTS FETVNDTSAK TSFKPLSFPK ADDIQTLLSA ALTNEQTCLE GLTTAASYSA TWTVRTGVAL PLVNDTKLLG VSLALFTKGW VPKKKKRAGF
201: AWAQPRSGSS THTKPFRLFR NGALPLKMTE KTKAVYESLS RRKLADGDSN GDGDDGSMVL ISDIVTVSQD GTGNFTNITA AVAAAPNNTD GSAGFFLIYV
301: TAGIYEEYIS IAKNKRYMMM IGDGINQTVV TGNRSVVDGW TTFNSATFAV TAPNFVAVNI TFRNTAGPEK HQAVALRSGA DFSIFYSCSF EAYQDTLYTH
401: SLRQFYRECD VYGTVDFIFG NAAVVFQNCN LYPRKPMPNQ FNAITAQGRS DPNQNTGTSI QNCTIKPADD LVSSNYTVKT YLGRPWKEYS RTVYMQSYID
501: GFVEPVGWRE WNGDFALSTL YYAEYNNTGP GSNTTNRVTW PGYHVINSTD AANFTVTGLF IEADWIWKTG VPYTSGLIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)