suba logo
AT1G02710.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
extracellular 0.972
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycine-rich protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 94175 Blast hits to 22560 proteins in 1554 species: Archae - 109; Bacteria - 35702; Metazoa - 26912; Fungi - 5192; Plants - 9321; Viruses - 1410; Other Eukaryotes - 15529 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EMBL:DQ446221EnsemblPlants:AT1G02710EnsemblPlants:AT1G02710.1entrez:839483GeneID:839483Gramene:AT1G02710.1
KEGG:ath:AT1G02710OMA:KGQWLHGProteomes:UP000006548RefSeq:NP_171771.1TAIR:AT1G02710UniGene:At.65876UniProt:Q3EDK2
Coordinates (TAIR10) chr1:-:589706..589996
Molecular Weight (calculated) 8127.19 Da
IEP (calculated) 4.58
GRAVY (calculated) -0.40
Length 96 amino acids
Sequence (TAIR10)
(BLAST)
1: MEAEIVGEAS AAVIMIGGLG LFGTHSLQAG GNGGGSGKGQ WLHGGGGEGG GGEGGGGEGG GGQKISKGGG GGGSGGGQRS SSGGGGGGGE GDGGGG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)