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AT1G02410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome c oxidase assembly protein CtaG / Cox11 family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cytochrome c oxidase assembly protein CtaG / Cox11 family; FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein CtaG/Cox11 (InterPro:IPR007533); Has 2749 Blast hits to 2749 proteins in 659 species: Archae - 0; Bacteria - 997; Metazoa - 98; Fungi - 130; Plants - 41; Viruses - 0; Other Eukaryotes - 1483 (source: NCBI BLink).
Protein Annotations
BioGrid:24599DNASU:839364eggNOG:COG3175eggNOG:KOG2540EMBL:AC064879EMBL:AK118687EMBL:BT005280
EMBL:CP002684EnsemblPlants:AT1G02410EnsemblPlants:AT1G02410.1entrez:839364Gene3D:2.60.370.10GeneID:839364Genevisible:Q8GWR0
GO:GO:0005507GO:GO:0005739GO:GO:0005743GO:GO:0009846GO:GO:0010101GO:GO:0032592GO:GO:0043621
GO:GO:1904960Gramene:AT1G02410.1HAMAP:MF_00155hmmpanther:PTHR21320hmmpanther:PTHR21320:SF3HOGENOM:HOG000264965InParanoid:Q8GWR0
IntAct:Q8GWR0InterPro:IPR007533InterPro:IPR023471KEGG:ath:AT1G02410KO:K02258OMA:RNESNHAPANTHER:PTHR21320
PaxDb:Q8GWR0Pfam:PF04442Pfam:Q8GWR0PhylomeDB:Q8GWR0PIR:E86154PRIDE:Q8GWR0PRO:PR:Q8GWR0
ProteinModelPortal:Q8GWR0Proteomes:UP000006548RefSeq:NP_171743.1SMR:Q8GWR0STRING:3702.AT1G02410.1SUPFAM:0043679SUPFAM:SSF110111
TAIR:AT1G02410TMHMM:TMhelixUniGene:At.42604UniGene:At.47883UniProt:Q8GWR0
Coordinates (TAIR10) chr1:+:491300..492762
Molecular Weight (calculated) 32606.30 Da
IEP (calculated) 8.11
GRAVY (calculated) -0.50
Length 287 amino acids
Sequence (TAIR10)
(BLAST)
001: MSWSKACRGT RISSYLENLH RTSQYPRTIL CSRYYTHGAC KSNEHYLRSK RVFWGSSSSW SLNSHSATAK SMLDSAHRQY STHSPSETKS QKMLYYLTAV
101: VFGMVGLTYA AVPLYRTFCQ ATGYGGTVQR KETVEEKIAR HSESGTVTER EIVVQFNADV ADGMQWKFTP TQREVRVKPG ESALAFYTAE NKSSAPITGV
201: STYNVTPMKA GVYFNKIQCF CFEEQRLLPG EQIDMPVFFY IDPEFETDPR MDGINNLILS YTFFKVSEEN TTETVNNNNS VPVQETN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)