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AT1G02090.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Proteasome component (PCI) domain protein
Curator
Summary (TAIR10)
encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.
Computational
Description (TAIR10)
FUSCA 5 (FUS5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); Has 689 Blast hits to 689 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 405; Fungi - 166; Plants - 80; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Protein Annotations
BioGrid:24477eggNOG:ENOG410XP7WeggNOG:KOG3250EMBL:AF063852EMBL:AF372934EMBL:AF395065EMBL:AF395066
EMBL:AY087971EMBL:AY133518EMBL:CP002684EMBL:U89959EnsemblPlants:AT1G02090EnsemblPlants:AT1G02090.1entrez:839241
EvolutionaryTrace:Q94JU3ExpressionAtlas:Q94JU3GeneID:839241Genevisible:Q94JU3GO:GO:0005829GO:GO:0007275GO:GO:0008180
GO:GO:0009585GO:GO:0010387GO:GO:0010388hmmpanther:PTHR15350HOGENOM:HOG000006003InParanoid:Q94JU3IntAct:Q94JU3
InterPro:IPR000717iPTMnet:Q94JU3KEGG:ath:AT1G02090KO:K12180OMA:SEFSPVFPaxDb:Q94JU3PDB:3CHM
PDBsum:3CHMPfam:Q94JU3PhylomeDB:Q94JU3PIR:T52188PRIDE:Q94JU3PRO:PR:Q94JU3ProteinModelPortal:Q94JU3
Proteomes:UP000006548Reactome:R-ATH-5696394Reactome:R-ATH-6781823RefSeq:NP_563645.1RefSeq:NP_849576.1SMART:SM00088SMR:Q94JU3
STRING:3702.AT1G02090.1TAIR:AT1G02090tair10-symbols:ATCSN7tair10-symbols:COP15tair10-symbols:CSN7tair10-symbols:FUS5UniGene:At.10718
UniProt:Q94JU3
Coordinates (TAIR10) chr1:-:387479..389568
Molecular Weight (calculated) 29470.50 Da
IEP (calculated) 5.45
GRAVY (calculated) -0.40
Length 260 amino acids
Sequence (TAIR10)
(BLAST)
001: MDIEQKQAEI IDQLVKRAST CKSEALGPLI IEATSHPSLF AFSEILALPN VAQLEGTTDS VYLDLLRLFA HGTWGDYKCN ATRLPHLSPD QILKLKQLTV
101: LTLAESNKVL PYDTLMVELD VSNVRELEDF LINECMYAGI VRGKLDQLKR CFEVPFAAGR DLRPGQLGNM LHTLSNWLNT SENLLISIQD KIKWADNMSE
201: MDKKHRKEAE EGVEEVKKSL SMKGDVDIRG NKEMFGEPSG VMDYEEDGIR PKRRRHPVTR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)