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AT1G01810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 12 Blast hits to 12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC009273EMBL:AY735500EMBL:AY773811EMBL:CP002684EnsemblPlants:AT1G01810EnsemblPlants:AT1G01810.1entrez:839247
GeneID:839247Gramene:AT1G01810.1HOGENOM:HOG000153072KEGG:ath:AT1G01810OMA:MNHCSESPIR:H86149Proteomes:UP000006548
RefSeq:NP_171686.1TAIR:AT1G01810UniGene:At.50921UniProt:Q9LQ74
Coordinates (TAIR10) chr1:+:295242..295724
Molecular Weight (calculated) 18540.10 Da
IEP (calculated) 11.07
GRAVY (calculated) -1.23
Length 160 amino acids
Sequence (TAIR10)
(BLAST)
001: MKPETKRSTA TTRRRTNDGG SPFNFSSLKQ AIEAIDAAKD TSINLSSLSV ALSAASREMK QRKEKSHRRR ETRKRDKKKK KKKDSNNNTK LVIGTKPETD
101: AELRRWFSYF DKSFKLSLPR KVKLTSPRKL NDHNKNLKEA PICELNTDFS MNHCSESFRY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)