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AT1G01770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.986
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGFCeggNOG:ENOG410XP3UEMBL:AK117153EMBL:CP002684EnsemblPlants:AT1G01770EnsemblPlants:AT1G01770.1entrez:837323
GeneID:837323Gramene:AT1G01770.1hmmpanther:PTHR13943hmmpanther:PTHR13943:SF48HOGENOM:HOG000084339InterPro:IPR010839KEGG:ath:AT1G01770
OMA:MGAANPIPfam:PF07287PhylomeDB:Q8GZ85Proteomes:UP000006548RefSeq:NP_171682.2STRING:3702.AT1G01770.1TAIR:AT1G01770
UniGene:At.14903UniProt:Q8GZ85
Coordinates (TAIR10) chr1:+:278759..282490
Molecular Weight (calculated) 69004.00 Da
IEP (calculated) 5.96
GRAVY (calculated) -0.11
Length 632 amino acids
Sequence (TAIR10)
(BLAST)
001: MANPDVKEIL CDCVINLREN PKRRRETVYV GCGAGFGGDR PLAALKLLQR VEELNYLVLE CLAERTLADR WLSMASGGLG YDPRVSEWMQ LLLPLAVERG
101: TCIITNMGAI DPSGAQKKVL EVAGELGLTI SVAVAHEVHF ETGSGSSFGG QYCSAGGTST YLGAAPIVEC LEKYQPNVII TSRVADAALF LAPMVYELGW
201: NWNDLELLAQ GTLAGHLLEC GCQLTGGYFM HPGDQYRDMA FPLLQDLSLP YAEIGYDGKV CVSKVEGSGG ILNTSTCAEQ LLYEIADPSA YITPDVVIDI
301: RGVSFLPLSD CKVQCSGAKP SSNTSVPEKL LRLIPKECGW KGWGEISYGG NGSIQRAKAS EFLVRSWMEE TIPGVNHCIL SYVIGVDSLK ATSNGTESWQ
401: SCGDIRLRMD GLFKLKEHAV QLTKEFTALY TNGPAGGGGI STGHKMEIVL EKRLVSRESV MWKTGLQHTN TSEPETSEHH SPEKMPKLPK ENPKNLTMRG
501: YQSGFHHSPA PSGQKIPLYS VAHSRAGDKG NDINFSIIPH YSPDVERLKL IITPQWVKHV MSVLLSTSSF LELDAKPMDE NVSVEIYDVE GIHAMNVVVR
601: NILDGGVNCS RRIDRHGKTI SDLILCQQVV LI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)