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AT1G01725.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.827
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00530.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC009273EMBL:AF332440EMBL:AY088343EMBL:CP002684EnsemblPlants:AT1G01725EnsemblPlants:AT1G01725.1entrez:839271
GeneID:839271Gramene:AT1G01725.1hmmpanther:PTHR37696hmmpanther:PTHR37696:SF1HOGENOM:HOG000006149KEGG:ath:AT1G01725OMA:MNPQIEK
PhylomeDB:Q9LQ84PIR:F86148Proteomes:UP000006548RefSeq:NP_563633.1STRING:3702.AT1G01725.1TAIR:AT1G01725UniGene:At.134
UniGene:At.57938UniProt:Q9LQ84
Coordinates (TAIR10) chr1:-:270016..270735
Molecular Weight (calculated) 6881.31 Da
IEP (calculated) 9.04
GRAVY (calculated) -0.10
Length 62 amino acids
Sequence (TAIR10)
(BLAST)
1: MNPQIEKVVK VTSVVATAVV SYFLLTADYG PEPNALDPIR QRILSAQDSV KEFIFPSKKS DK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)