AT1G01695.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G00440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:252947..254495 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50406.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.95 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.62 | ||||||||||||||||||||||||||||
| Length | 433 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPVEKHVEEK LRSNRKERGW ISGIFRRKKR SPQEEEVDNE NNSSEDSRLM GAKNLHLFLS EIMRKLKHAI RKEKPDKRLL GKKKSFEKSL STKDHFFLER 101: MTSISQKRFH QEHNDPNLAT SKQVQRNHER IVWLPEYSSP FSSPGRIWKQ NSTVLLRSSS YDFIKSETIA DDSITLKEIG TASSSEGSSS PLLSKSNQIV 201: DEMSKVAAYG AENEGEFLEE TLSLPSVGSP SHYISKTEEY DFVLEPLFIS PARGEAKIQP LCNQLQEKNR HKESVFKYVK AVLEAIDSNW EELYLKTEIS 301: DQLLYPALIS NIPFYPNQLC VEHELLFDCI NEVLFEFCRF PQWVSFAETR TQVLPYSVES IVPEVQEKVY CHLLPMQLRR SLEERVREDM AKHRSWLDIR 401: CDLECIGFET SELILNELLE QLMLELEDNH KNG |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)