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AT1G01695.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G00440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUG6eggNOG:ENOG41106WVEMBL:CP002684EnsemblPlants:AT1G01695EnsemblPlants:AT1G01695.1entrez:6241450GeneID:6241450
GO:GO:0016740Gramene:AT1G01695.1hmmpanther:PTHR21726hmmpanther:PTHR21726:SF30HOGENOM:HOG000015118InParanoid:B3H5G8InterPro:IPR025486
KEGG:ath:AT1G01695OMA:NHERIVWPaxDb:B3H5G8Pfam:PF14309PhylomeDB:B3H5G8PRIDE:B3H5G8ProteinModelPortal:B3H5G8
Proteomes:UP000006548RefSeq:NP_001117211.1TAIR:AT1G01695UniGene:At.73898UniProt:B3H5G8
Coordinates (TAIR10) chr1:+:252947..254495
Molecular Weight (calculated) 50406.90 Da
IEP (calculated) 5.95
GRAVY (calculated) -0.62
Length 433 amino acids
Sequence (TAIR10)
(BLAST)
001: MPVEKHVEEK LRSNRKERGW ISGIFRRKKR SPQEEEVDNE NNSSEDSRLM GAKNLHLFLS EIMRKLKHAI RKEKPDKRLL GKKKSFEKSL STKDHFFLER
101: MTSISQKRFH QEHNDPNLAT SKQVQRNHER IVWLPEYSSP FSSPGRIWKQ NSTVLLRSSS YDFIKSETIA DDSITLKEIG TASSSEGSSS PLLSKSNQIV
201: DEMSKVAAYG AENEGEFLEE TLSLPSVGSP SHYISKTEEY DFVLEPLFIS PARGEAKIQP LCNQLQEKNR HKESVFKYVK AVLEAIDSNW EELYLKTEIS
301: DQLLYPALIS NIPFYPNQLC VEHELLFDCI NEVLFEFCRF PQWVSFAETR TQVLPYSVES IVPEVQEKVY CHLLPMQLRR SLEERVREDM AKHRSWLDIR
401: CDLECIGFET SELILNELLE QLMLELEDNH KNG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)