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AT1G01600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 86, subfamily A, polypeptide 4
Curator
Summary (TAIR10)
Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly at highest level in mature stems and flowers.
Computational
Description (TAIR10)
cytochrome P450, family 86, subfamily A, polypeptide 4 (CYP86A4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 2 (TAIR:AT4G00360.1); Has 27858 Blast hits to 27767 proteins in 1485 species: Archae - 44; Bacteria - 2493; Metazoa - 10417; Fungi - 6140; Plants - 7807; Viruses - 3; Other Eukaryotes - 954 (source: NCBI BLink).
Protein Annotations
EC:1.14.14.1eggNOG:COG2124eggNOG:KOG0157EMBL:AC061957EMBL:AK117400EMBL:CP002684EnsemblPlants:AT1G01600
EnsemblPlants:AT1G01600.1entrez:839347Gene3D:1.10.630.10GeneID:839347Genevisible:Q9LMM1GO:GO:0005506GO:GO:0006631
GO:GO:0016021GO:GO:0018685GO:GO:0020037GO:GO:0070330Gramene:AT1G01600.1gramene_pathway:1.14.13.-gramene_pathway:PWY-1121
gramene_pathway:PWY-321hmmpanther:PTHR24296hmmpanther:PTHR24296:SF9HOGENOM:HOG000237580InParanoid:Q9LMM1InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972iPTMnet:Q9LMM1KEGG:ath:AT1G01600KO:K15398OMA:NARRWNCPaxDb:Q9LMM1Pfam:PF00067
Pfam:Q9LMM1PhylomeDB:Q9LMM1PIR:G86146PRIDE:Q9LMM1PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9LMM1
PROSITE:PS00086ProteinModelPortal:Q9LMM1Proteomes:UP000006548RefSeq:NP_171666.1scanprosite:PS00086SMR:Q9LMM1STRING:3702.AT1G01600.1
SUPFAM:SSF48264TAIR:AT1G01600tair10-symbols:CYP86A4UniGene:At.28042UniProt:Q9LMM1
Coordinates (TAIR10) chr1:+:219200..220994
Molecular Weight (calculated) 62606.80 Da
IEP (calculated) 8.10
GRAVY (calculated) -0.10
Length 554 amino acids
Sequence (TAIR10)
(BLAST)
001: MEISNAMLLV AIVTGYWLWF KRISRWLKGP RVWPLLGSLP GLIEQRDRMH EWITENLRAC GGTYQTCIFA VPFLAKKQGL VTVTCDPKNL EHMLKTRFDN
101: YPKGPTWQSV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMGRW VNRGIKLRFC PILATAQDNA EPVDLQDLIL RLTFDNICGL AFGKDTRTCA
201: PGLPENGFAS AFDRATEASL QRFIIPKFMW KLKKWLGLGL EVSLSRSLGE IDEYLAAVIN TRKQELMSQQ ESGTHQRHDD LLSRFMMKKT ESYSDTFLQH
301: VALNFILAGR DTSSVALSWF FWLITMHPTV EDKIVREICS VLIETRGTDD VASWTEEPLG FDEIDRLVYL KAAISETLRL YPSVPEDSKH VENDDVLPDG
401: TFVPAGSSVT YSIYAAGRMK STWGEDCLEF NPERWISPID GKFINHDQYR FVAFNAGPRI CLGKDLAYLQ MKTIAAAVLL RHRLTVVPGH KVEQKMSLTL
501: FMKNGLLVNL YKRDLQGIIK SLVVKKSDGV SNGQCNGVIG EGVAVYLNTG VAVV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)