suba logo
AT1G01580.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 0.785
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : ferric reduction oxidase 2
Curator
Summary (TAIR10)
Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.
Computational
Description (TAIR10)
ferric reduction oxidase 2 (FRO2); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 1 (TAIR:AT1G01590.1); Has 2711 Blast hits to 2707 proteins in 388 species: Archae - 5; Bacteria - 307; Metazoa - 560; Fungi - 1180; Plants - 483; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G01580-MONOMERBioGrid:24646EC:1.16.1.7eggNOG:ENOG410XNZYeggNOG:KOG0039EMBL:AC061957EMBL:AY302057
EMBL:CP002684EMBL:Y09581EnsemblPlants:AT1G01580EnsemblPlants:AT1G01580.1entrez:839411GeneID:839411GO:GO:0000293
GO:GO:0005886GO:GO:0006811GO:GO:0009617GO:GO:0015688GO:GO:0016021GO:GO:0046872GO:GO:0055072
Gramene:AT1G01580.1gramene_pathway:1.16.1.7gramene_pathway:PWY-5934hmmpanther:PTHR11972hmmpanther:PTHR11972:SF41HOGENOM:HOG000006154InParanoid:P92949
InterPro:IPR013112InterPro:IPR013121InterPro:IPR013130InterPro:IPR017927InterPro:IPR017938KEGG:ath:AT1G01580OMA:RMFELFY
PaxDb:P92949Pfam:P92949Pfam:PF01794Pfam:PF08022Pfam:PF08030Pfscan:PS51384PhylomeDB:P92949
PIR:E86146PRIDE:P92949PRO:PR:P92949PROSITE:PS51384ProteinModelPortal:P92949Proteomes:UP000006548RefSeq:NP_171664.1
SMR:P92949STRING:3702.AT1G01580.1SUPFAM:SSF52343SUPFAM:SSF63380TAIR:AT1G01580tair10-symbols:ATFRO2tair10-symbols:FRD1
tair10-symbols:FRO2TMHMM:TMhelixUniGene:At.42640UniProt:P92949
Coordinates (TAIR10) chr1:+:209395..212810
Molecular Weight (calculated) 81505.60 Da
IEP (calculated) 9.74
GRAVY (calculated) 0.25
Length 725 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIEKSNNGG SNPSAGEEFK DMIKGVTKFL MMVIFLGTIM LWIMMPTLTY RTKWLPHLRI KFGTSTYFGA TGTTLFMYMF PMMVVACLGC VYLHFKNRKS
101: PHHIDRETKG GVWSKLRKPM LVKGPLGIVS VTEITFLAMF VALLLWCFIT YLRNSFATIT PKSAAAHDES LWQAKLESAA LRLGLIGNIC LAFLFLPVAR
201: GSSLLPAMGL TSESSIKYHI WLGHMVMALF TVHGLCYIIY WASMHEISQM IMWDTKGVSN LAGEIALAAG LVMWATTYPK IRRRFFEVFF YTHYLYIVFM
301: LFFVLHVGIS FSFIALPGFY IFLVDRFLRF LQSRENVRLL AARILPSDTM ELTFSKNSKL VYSPTSIMFV NIPSISKLQW HPFTITSSSK LEPEKLSIVI
401: KKEGKWSTKL HQRLSSSDQI DRLAVSVEGP YGPASADFLR HEALVMVCGG SGITPFISVI RDLIATSQKE TCKIPKITLI CAFKKSSEIS MLDLVLPLSG
501: LETELSSDIN IKIEAFITRD NDAGDEAKAG KIKTLWFKPS LSDQSISSIL GPNSWLWLGA ILASSFLIFM IIIGIITRYY IYPIDHNTNK IYSLTSKTII
601: YILVISVSIM ATCSAAMLWN KKKYGKVESK QVQNVDRPSP TSSPTSSWGY NSLREIESTP QESLVQRTNL HFGERPNLKK LLLDVEGSSV GVLVCGPKKM
701: RQKVAEICSS GLAENLHFES ISFSW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)