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AT1G01540.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G01330.2); Has 117942 Blast hits to 116606 proteins in 4399 species: Archae - 110; Bacteria - 14062; Metazoa - 43660; Fungi - 9737; Plants - 32599; Viruses - 442; Other Eukaryotes - 17332 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002684EnsemblPlants:AT1G01540EnsemblPlants:AT1G01540.1entrez:839533ExpressionAtlas:F4HSC9
GeneID:839533GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT1G01540.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF156
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441iPTMnet:F4HSC9PaxDb:F4HSC9Pfam:PF00069
Pfscan:PS50011PRIDE:F4HSC9PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:F4HSC9Proteomes:UP000006548
RefSeq:NP_849573.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:F4HSC9STRING:3702.AT1G01540.2SUPFAM:SSF56112
TAIR:AT1G01540TMHMM:TMhelixUniGene:At.24027UniProt:F4HSC9
Coordinates (TAIR10) chr1:+:195980..197973
Molecular Weight (calculated) 42777.50 Da
IEP (calculated) 7.14
GRAVY (calculated) -0.02
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVYDAAFLN TELSKPTSIF GLRLWVVIGI LLGSLIVIAL FLLSLCLTSR RKNRKPRADF ASAAIATPPI SKEIKEIVPA QNQSVPAEIQ VDIGKIEHRV
101: VFSDRVSSGE SRGTASASET ASYSGSGNCG PEVSHLGWGR WYTLRELEAA TNGLCEENVI GEGGYGIVYR GILTDGTKVA VKNLLNNRGQ AEKEFKVEVE
201: VIGRVRHKNL VRLLGYCVEG AYRMLVYDFV DNGNLEQWIH GDVGDVSPLT WDIRMNIILG MAKGLAYLHE GLEPKVVHRD IKSSNILLDR QWNAKVSDFG
301: LAKLLGSESS YVTTRVMGTF GYVAPEYACT GMLNEKSDIY SFGILIMEII TGRNPVDYSR PQGEVFDKHI QSSLCFCKWS YYVSWL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)