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AT1G01480.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : 1-amino-cyclopropane-1-carboxylate synthase 2
Curator
Summary (TAIR10)
a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.
Computational
Description (TAIR10)
1-amino-cyclopropane-1-carboxylate synthase 2 (ACS2); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 30194 Blast hits to 30192 proteins in 2936 species: Archae - 881; Bacteria - 20730; Metazoa - 650; Fungi - 807; Plants - 1338; Viruses - 0; Other Eukaryotes - 5788 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-745-MONOMERBioCyc:MetaCyc:AT1G01480-MONOMERBioGrid:22324BRENDA:4.4.1.14EC:4.4.1.14eggNOG:COG0436eggNOG:KOG0256
EMBL:AC061957EMBL:AF334719EMBL:AY052207EMBL:AY143877EMBL:CP002684EMBL:M95594EMBL:M95595
EMBL:Y12776EMBL:Z12614EnsemblPlants:AT1G01480EnsemblPlants:AT1G01480.1entrez:837082Gene3D:3.40.640.10Gene3D:3.90.1150.10
GeneID:837082Genevisible:Q06402GO:GO:0009693GO:GO:0009835GO:GO:0016847GO:GO:0030170GO:GO:0042218
HOGENOM:HOG000011234InParanoid:Q06402IntAct:Q06402InterPro:IPR004838InterPro:IPR004839InterPro:IPR015421InterPro:IPR015422
InterPro:IPR015424iPTMnet:Q06402KEGG:ath:AT1G01480KO:K01762OMA:GENSEYFPaxDb:Q06402Pfam:PF00155
Pfam:Q06402PhylomeDB:Q06402PIR:A47199PRIDE:Q06402PRO:PR:Q06402PROSITE:PS00105ProteinModelPortal:Q06402
Proteomes:UP000006548RefSeq:NP_171655.1RefSeq:NP_849572.1SABIO-RK:Q06402scanprosite:PS00105SMR:Q06402STRING:3702.AT1G01480.1
SUPFAM:SSF53383TAIR:AT1G01480tair10-symbols:ACS2tair10-symbols:AT-ACC2UniGene:At.164UniPathway:UPA00384UniProt:Q06402
Coordinates (TAIR10) chr1:+:175862..178051
Molecular Weight (calculated) 55534.60 Da
IEP (calculated) 7.58
GRAVY (calculated) -0.20
Length 496 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLPGKNKGA VLSKIATNNQ HGENSEYFDG WKAYDKDPFH LSRNPHGIIQ MGLAENQLCL DLIKDWVKEN PEASICTLEG IHQFSDIANF QDYHGLKKFR
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)