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AT1G01460.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

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SUBAcon:
cytosol 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphatidylinositol-4-phosphate 5-kinase, core
Curator
Summary (TAIR10)
Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.
Computational
Description (TAIR10)
PIPK11; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol phosphate kinase 10 (TAIR:AT4G01190.1); Has 2109 Blast hits to 1621 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 980; Fungi - 317; Plants - 416; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G01460-MONOMERBRENDA:2.7.1.68EC:2.7.1.68eggNOG:COG5253eggNOG:KOG0229EMBL:AC061957EMBL:CP002684
EMBL:DQ056443EMBL:Y12776EnsemblPlants:AT1G01460EnsemblPlants:AT1G01460.1entrez:839469ExpressionAtlas:Q9LMN1Gene3D:3.30.800.10
Gene3D:3.30.810.10GeneID:839469Genevisible:Q9LMN1GO:GO:0005524GO:GO:0016308Gramene:AT1G01460.1hmmpanther:PTHR23086
hmmpanther:PTHR23086:SF33HOGENOM:HOG000193875InParanoid:Q9LMN1InterPro:IPR002498InterPro:IPR023610InterPro:IPR027483InterPro:IPR027484
KEGG:ath:AT1G01460KO:K00889OMA:QHSSKTIPANTHER:PTHR23086PaxDb:Q9LMN1Pfam:PF01504Pfam:Q9LMN1
Pfscan:PS51455PhylomeDB:Q9LMN1PIR:C86145PRO:PR:Q9LMN1PROSITE:PS51455ProteinModelPortal:Q9LMN1Proteomes:UP000006548
Reactome:R-ATH-1660499RefSeq:NP_171653.2SMART:SM00330SMR:Q9LMN1STRING:3702.AT1G01460.1SUPFAM:SSF56104TAIR:AT1G01460
tair10-symbols:ATPIPK11tair10-symbols:PIPK11UniGene:At.49838UniProt:Q08AA6UniProt:Q9LMN1
Coordinates (TAIR10) chr1:+:169115..171154
Molecular Weight (calculated) 48551.90 Da
IEP (calculated) 9.14
GRAVY (calculated) -0.49
Length 427 amino acids
Sequence (TAIR10)
(BLAST)
001: MFTREITAKD VKATEKNRIR YSSKHIKHLP PGTITEFEWK DYCPLGFRLI QELEDINHDE YMKSICNDET LRKLSTSKVG NMFLLSKDDR FLIKILRKSE
101: IKVILEMLPG YFRHIHKYRS TLLSKNYGAH SVKPIGGVKT YFVVMSNILQ SDVFMNKVYD LKGSSQGRTN KKIKVRDKTI LKDIDLDFCF YVDSLARHRL
201: IKQTKLDCEL LEDEGIMDYS LMLGLQVKGS CHGSIDELIP VYDSFTSRGS VDSNSSKFMK TASNSPDRSS STMYSCTPSR NSVDSENSVN IQSVASISPS
301: PAQTNASDSP YESLVSKTNL TNIFQNSSST NFGMKIPGRA RRVGRGESGS VVGKQSREGG EEWYDVILYL GIIDIFQDYG VRKRLEHCYK SIQHSSKTIS
401: AVHPKMYSSR FQDFVSQIFL PDEDPSH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)