suba logo
AT1G01360.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : regulatory component of ABA receptor 1
Curator
Summary (TAIR10)
Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor.
Computational
Description (TAIR10)
regulatory component of ABA receptor 1 (RCAR1); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 7 (TAIR:AT4G01026.1); Has 395 Blast hits to 395 proteins in 28 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:23691eggNOG:ENOG410IIK9eggNOG:ENOG4111HU5EMBL:AC023628EMBL:AK227623EMBL:AY087967EMBL:BT006399
EMBL:CP002684EnsemblPlants:AT1G01360EnsemblPlants:AT1G01360.1entrez:838452Gene3D:3.30.530.20GeneID:838452Genevisible:Q84MC7
GO:GO:0004864GO:GO:0004872GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0009738GO:GO:0010427
GO:GO:0042803GO:GO:0043086GO:GO:0080163Gramene:AT1G01360.1hmmpanther:PTHR31213hmmpanther:PTHR31213:SF4HOGENOM:HOG000238422
InParanoid:Q84MC7IntAct:Q84MC7InterPro:IPR019587InterPro:IPR023393KEGG:ath:AT1G01360KO:K14496OMA:DEEHILC
PaxDb:Q84MC7PDB:3OQUPDB:3W9RPDBsum:3OQUPDBsum:3W9RPfam:PF10604Pfam:Q84MC7
PhylomeDB:Q84MC7PRIDE:Q84MC7PRO:PR:Q84MC7ProteinModelPortal:Q84MC7Proteomes:UP000006548RefSeq:NP_563626.1SMR:Q84MC7
STRING:3702.AT1G01360.1SUPFAM:SSF55961TAIR:AT1G01360tair10-symbols:PYL9tair10-symbols:RCAR1UniGene:At.42653UniProt:Q84MC7
Coordinates (TAIR10) chr1:+:142138..142914
Molecular Weight (calculated) 20902.10 Da
IEP (calculated) 6.30
GRAVY (calculated) -0.23
Length 187 amino acids
Sequence (TAIR10)
(BLAST)
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)