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AT1G01305.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2340eggNOG:KOG3017EMBL:CP002684EMBL:DQ487433
EnsemblPlants:AT1G01305EnsemblPlants:AT1G01305.1entrez:6240609GeneID:6240609
Gramene:AT1G01305.1KEGG:ath:AT1G01305OMA:SEWCIALProteomes:UP000006548
RefSeq:NP_001117205.1STRING:3702.AT1G01305.1TAIR:AT1G01305UniGene:At.69461
UniProt:Q1G401
Coordinates (TAIR10) chr1:+:119429..119854
Molecular Weight (calculated) 15835.80 Da
IEP (calculated) 10.84
GRAVY (calculated) -0.11
Length 141 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKPRSVSPT IFLLVILLVT AGEKTEAKPW WKKVGDSIGN IAGGIRNAVG NYKPVEMGLS LKGGFCVRKL LSLNTNVFSE WCIALNDPRA PMYMKIENIP
101: SGVSIESILK KPIDLIKNHY PNFLKVWNFN QKIKRKPRRA L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)