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AT1G01290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cofactor of nitrate reductase and xanthine dehydrogenase 3
Curator
Summary (TAIR10)
COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria
Computational
Description (TAIR10)
cofactor of nitrate reductase and xanthine dehydrogenase 3 (CNX3); CONTAINS InterPro DOMAIN/s: Molybdopterin cofactor biosynthesis C (MoaC) domain (InterPro:IPR002820); Has 5242 Blast hits to 5240 proteins in 1916 species: Archae - 213; Bacteria - 3669; Metazoa - 104; Fungi - 75; Plants - 45; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G01290-MONOMERBioCyc:ARA:GQT-2527-MONOMERBioCyc:MetaCyc:AT1G01290-MONOMERBioGrid:24680eggNOG:COG0315eggNOG:ENOG410ISK0EMBL:AC023628
EMBL:BT025641EMBL:CP002684EMBL:Z48046EnsemblPlants:AT1G01290EnsemblPlants:AT1G01290.1EnsemblPlants:AT1G01290.2entrez:839445
Gene3D:3.30.70.640GeneID:839445Genevisible:Q39056GO:GO:0005739GO:GO:0005759GO:GO:0006777GO:GO:0009507
GO:GO:0061597Gramene:AT1G01290.1Gramene:AT1G01290.2gramene_pathway:3.5.4.-gramene_pathway:PWY-5354-ARAHAMAP:MF_01224_Bhmmpanther:PTHR22960
HOGENOM:HOG000228417InParanoid:Q39056InterPro:IPR002820InterPro:IPR023045InterPro:IPR023046KEGG:ath:AT1G01290KO:K03639
MINT:MINT-8058836OMA:QMGKGDVPaxDb:Q39056Pfam:PF01967Pfam:Q39056PhylomeDB:Q39056PIR:T46961
PRIDE:Q39056PRO:PR:Q39056ProteinModelPortal:Q39056Proteomes:UP000006548RefSeq:NP_001154299.1RefSeq:NP_171636.1SMR:Q39056
STRING:3702.AT1G01290.1SUPFAM:0046578SUPFAM:SSF55040TAIR:AT1G01290tair10-symbols:CNX3TIGRfam:TIGR00581TIGRFAMs:TIGR00581
UniGene:At.17UniPathway:UPA00344UniProt:Q39056
Coordinates (TAIR10) chr1:+:114299..115296
Molecular Weight (calculated) 29514.40 Da
IEP (calculated) 8.22
GRAVY (calculated) -0.27
Length 270 amino acids
Sequence (TAIR10)
(BLAST)
001: MISTLRRAVF LRRFPAVVSP IKRAFSSRID DEFDPQIMNI NELNQEMQSI FGQEPSPDGP GTMDFSELKS SKIEPLRSKN IDFRQQIEYH KSTHSSKNDS
101: QAIEQYAKVA SDMSKLTHVG IAGEAQMVDV SSKDNSKRTA LACCKVILGK RVFDLVLANQ MGKGDVLGVA KIAGINGAKQ TSSLIPLCHN IALTHVRVDL
201: RLNPEDFSVD IEGEASCTGK TGVEMEAMTA VSVAGLTVYD MCKAASKDIS ITDVRLERKT GGKSGSWSRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)