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AT1G01240.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.921
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JTJ4eggNOG:ENOG41107SWEMBL:AC023628EMBL:AF428444EMBL:AY056171EMBL:AY091196EMBL:CP002684
EnsemblPlants:AT1G01240EnsemblPlants:AT1G01240.1EnsemblPlants:AT1G01240.2EnsemblPlants:AT1G01240.3entrez:839274GeneID:839274GO:GO:0016021
Gramene:AT1G01240.1Gramene:AT1G01240.2Gramene:AT1G01240.3hmmpanther:PTHR33868hmmpanther:PTHR33868:SF2IntAct:Q9LNJ7KEGG:ath:AT1G01240
ncoils:CoilOMA:ATTPWWRPhylomeDB:Q9LNJ7PIR:F86142Proteomes:UP000006548RefSeq:NP_563623.1RefSeq:NP_973735.1
RefSeq:NP_973736.1STRING:3702.AT1G01240.1TAIR:AT1G01240TMHMM:TMhelixUniGene:At.26834UniProt:Q9LNJ7
Coordinates (TAIR10) chr1:+:100683..101678
Molecular Weight (calculated) 37513.50 Da
IEP (calculated) 9.02
GRAVY (calculated) -0.71
Length 331 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAAEARALW QRTASRCFVV HEDAKMAPRL ACCQHQQSSS GNTEKNSFSS GSFGDSSDFS CDTKWWLKGS TGFDEEVTNS FLEDTKCKKL HEFVDLIGIR
101: EEEDYSFISK KADATTPWWR STTDKDELAL MVATKSVDHN IQNCDLPPPQ KLHKSIHSSS GEKGFKTAVK SPWKQGVWKD RFERSLSYNG STESKNTSPM
201: SSPRSDDLSK GQLLEALRHS QTRAREAERA AREACAEKDR VITILLKQAS QMLAYKQWLK LLEMEALYLQ MKKEEEQEEQ VKGMNLKKRK QRGEKKKKGE
301: TGRYMMAFAL GFSLIGAGLL LGWTVGWLLP F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)