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AT1G01190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.966
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 78, subfamily A, polypeptide 8
Curator
Summary (TAIR10)
member of CYP78A
Computational
Description (TAIR10)
cytochrome P450, family 78, subfamily A, polypeptide 8 (CYP78A8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, LP.02 two leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 6 (TAIR:AT2G46660.1); Has 32104 Blast hits to 32001 proteins in 1725 species: Archae - 48; Bacteria - 3617; Metazoa - 11430; Fungi - 6777; Plants - 9112; Viruses - 3; Other Eukaryotes - 1117 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2124eggNOG:KOG0156EMBL:CP002684EnsemblPlants:AT1G01190EnsemblPlants:AT1G01190.1entrez:839233Gene3D:1.10.630.10
GeneID:839233GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550
Gramene:AT1G01190.1hmmpanther:PTHR24298hmmpanther:PTHR24298:SF46InParanoid:F4HS79InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT1G01190KO:K00517OMA:FEWLPSVPaxDb:F4HS79Pfam:PF00067PRIDE:F4HS79PRINTS:PR00385
PRINTS:PR00463PROSITE:PS00086ProteinModelPortal:F4HS79Proteomes:UP000006548RefSeq:NP_171627.1scanprosite:PS00086SMR:F4HS79
STRING:3702.AT1G01190.1SUPFAM:SSF48264TAIR:AT1G01190tair10-symbols:CYP78A8TMHMM:TMhelixUniGene:At.51445UniProt:F4HS79
Coordinates (TAIR10) chr1:-:83045..84864
Molecular Weight (calculated) 60318.30 Da
IEP (calculated) 8.22
GRAVY (calculated) 0.00
Length 535 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTEIESLWV FALASKFNIY MQQHFASLLV AIAITWFTIT IVFWSTPGGP AWGKYFFTRR FISLDYNRKY KNLIPGPRGF PLVGSMSLRS SHVAHQRIAS
101: VAEMSNAKRL MAFSLGDTKV VVTCHPAVAK EILNSSVFAD RPVDETAYGL MFNRAMGFAP NGTYWRTLRR LGSNHLFNPK QIKQSEDQRR VIATQMVNAF
201: ARNPKSACAV RDLLKTASLC NMMGLVFGRE YELESNNNLE SECLKGLVEE GYDLLGTLNW TDHLPWLAGL DFQQIRFRCS QLVPKVNLLL SRIIHEQRAA
301: TGNFLDMLLS LQGSEKLSES DMVAVLWEMI FRGTDTVAVL VEWVLARIVM HPKVQLTVHD ELDRVVGRSR TVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT SVDGYHVPAG TTAMVNMWAI ARDPHVWEDP LEFKPERFVA KEGEAEFSVF GSDLRLAPFG SGKRVCPGKN LGLTTVSFWV ATLLHEFEWL
501: PSVEANPPDL SEVLRLSCEM ACPLIVNVSS RRKIM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)