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AT1G01170.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1138)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1138); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1138 (InterPro:IPR009515); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1138) (TAIR:AT4G00860.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J14XeggNOG:ENOG410YZCAEMBL:BT024529EMBL:CP002684EnsemblPlants:AT1G01170EnsemblPlants:AT1G01170.1EnsemblPlants:AT1G01170.2
entrez:839263GeneID:839263GO:GO:0005739GO:GO:0016020GO:GO:0016021Gramene:AT1G01170.1Gramene:AT1G01170.2
hmmpanther:PTHR34267hmmpanther:PTHR34267:SF1HOGENOM:HOG000239250InterPro:IPR009515KEGG:ath:AT1G01170OMA:WAATDEKPfam:PF06592
PhylomeDB:Q2HIQ2Proteomes:UP000006548RefSeq:NP_001030926.1RefSeq:NP_171625.1STRING:3702.AT1G01170.1TAIR:AT1G01170TMHMM:TMhelix
UniGene:At.11894UniGene:At.71103UniProt:Q2HIQ2
Coordinates (TAIR10) chr1:-:74105..74443
Molecular Weight (calculated) 9062.89 Da
IEP (calculated) 10.32
GRAVY (calculated) -0.18
Length 83 amino acids
Sequence (TAIR10)
(BLAST)
1: MASGGKAKYI IGALIGSFGI SYIFDKVISD NKIFGGTTPG TVSNKEWWAA TDEKFQAWPR TAGPPVVMNP ISRQNFIVKT RPE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)