ATMG00580.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : NADH dehydrogenase subunit 4 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
NADH dehydrogenase subunit 4 | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NADH dehydrogenase subunit 4 (NAD4); CONTAINS InterPro DOMAIN/s: NADH-quinone oxidoreductase, chain M (InterPro:IPR010227), NADH:ubiquinone oxidoreductase, chain 4 (InterPro:IPR003918), NADH:ubiquinone/plastoquinone oxidoreductase (InterPro:IPR001750); BEST Arabidopsis thaliana protein match is: NADH-Ubiquinone/plastoquinone (complex I) protein (TAIR:ATCG01050.1). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chrM:+:161693..169674 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55235.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.37 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.69 | ||||||||||||||||||||||||||||||||
| Length | 495 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL 101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL 201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR 301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE 401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)