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AT5G61360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.854
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
EMBL:AB010073EMBL:BT010924EMBL:BT020599EMBL:CP002688
EnsemblPlants:AT5G61360EnsemblPlants:AT5G61360.1entrez:836257GeneID:836257
Gramene:AT5G61360.1hmmpanther:PTHR37206hmmpanther:PTHR37206:SF1HOGENOM:HOG000151147
KEGG:ath:AT5G61360OMA:INHENLYPhylomeDB:Q9FLJ7Proteomes:UP000006548
RefSeq:NP_200944.2TAIR:AT5G61360UniGene:At.28539UniGene:At.66671
UniProt:Q9FLJ7
Coordinates (TAIR10) chr5:+:24671051..24671797
Molecular Weight (calculated) 24472.00 Da
IEP (calculated) 8.51
GRAVY (calculated) -0.47
Length 210 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEGEEQRRI THLDLRNEPQ FPMVFVREST CFAKDDLAIF PPINHENLYV NGLESPSVSS SSSSSSSRLS DSSFSPSDSD EQFQFSRKSH SQPSEDVGKS
101: PWKSVIEIDI IQGWWKILLA RVMSNFQNLV TCFSRNSLCS FSKTLRSFYS VMVIFLWWWK RNRTRRRLEK GEIIAAHLRD TIKERDERIA QLLHQITQMN
201: ELLVKITHSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)