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AT5G41761.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:21311031 (2011): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2JKeggNOG:ENOG410ZCA0EMBL:CP002688EMBL:DQ487615
EnsemblPlants:AT5G41761EnsemblPlants:AT5G41761.1entrez:6241304GeneID:6241304
Gramene:AT5G41761.1hmmpanther:PTHR33513hmmpanther:PTHR33513:SF4KEGG:ath:AT5G41761
OMA:IPLHYPKPhylomeDB:Q1G3G9Proteomes:UP000006548RefSeq:NP_001119353.1
TAIR:AT5G41761UniGene:At.69128UniProt:Q1G3G9
Coordinates (TAIR10) chr5:+:16711437..16711742
Molecular Weight (calculated) 11826.70 Da
IEP (calculated) 7.09
GRAVY (calculated) -1.20
Length 101 amino acids
Sequence (TAIR10)
(BLAST)
001: MGIKFSQGPS NTTIHNRSHQ DGEDQRNETA TKINHDKPQN QSSSFQIPLH YPKYTKSDYE KMPEWQLDRL LREYGLPVIG DSYEKRKFAI GAFLWSSENE
101: H
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)