AT5G39020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Malectin/receptor-like protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Malectin/receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G39030.1); Has 113939 Blast hits to 112470 proteins in 4297 species: Archae - 118; Bacteria - 12172; Metazoa - 42643; Fungi - 9539; Plants - 32560; Viruses - 275; Other Eukaryotes - 16632 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:15616917..15619358 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90452.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.94 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 813 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNCNVLFLLS VLVSVTAGVT AAYHPTDVFL FNCGDTSNNV DNSGRNWTVE SRQILSSNLV NASFTSEASY QKAGVSRIPY MKARIFRSEF TYSFPVTPGS 101: IFLRLYFYPT QYKSGFDAVN SFFSVKVNGF TLLRNFNADS TVQASIPLSN SLIKEFIIPV HQTLNLTFTP SKNLLAFVNG IEIVSMPDRF YSKGGFDNVL 201: RNVSSDVDFQ IDNSTAFESV HRLNVGGQIV NEVDDSGMFR RWLSDDSFGN SGSIVNVPGV KINYTEKTPA YVAPYDVYAT SRLMGNSSNL MFNLTGMFLT 301: VDAGYNYLVR LHFCETLPQV TKAGQRVFSI FVEDKMAKKE TDVIRLSGGP RIPMYLDFSV YVGFESGMIQ PELRLDLVPL KDTNQTYYDA ILSGVEILKL 401: NDSDGNLARP NPELLVSTDS TPDDSNVTPP IKGKPHVLVI ILIVVGSVIG LATFIVIIML LIRQMKRKKN KKENSVIMFK LLLKQYIYAE LKKITKSFSH 501: TVGKGGFGTV YRGNLSNGRT VAVKVLKDLK GNGDDFINEV TSMSQTSHVN IVSLLGFCYE GSKRAIISEF LEHGSLDQFI SRNKSLTPNV TTLYGIALGI 601: ARGLEYLHYG CKTRIVHFDI KPQNILLDDN FCPKVADFGL AKLCEKRESI LSLIDTRGTI GYIAPEVVSR MYGGISHKSD VYSYGMLVLD MIGARNKVET 701: TTCNGSTAYF PDWIYKDLEN GDQTWIIGDE INEEDNKIVK KMILVSLWCI RPCPSDRPPM NKVVEMIEGS LDALELPPKP SRHISTELVL ESSSLSDGQE 801: AEKQTQTLDS TII |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)