AT5G38280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PR5-like receptor kinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:15293325..15295838 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73955.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.65 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 665 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEGFSLSLM FLLVSHFFVS GVMSRNFTIE NKCDYTVWPG FLTMTTAVSL PTNGFSLKKG ESRVINVPPS WSGRLWGRSF CSTSSTGNFS CATGDCGSGK 101: IECSDSGARP PTTLIDFTLD ATDGQDFYDV SVVDGYNLPL VVVPQRLGSG RTCSNVGCVV NLNKTCPSEL KVMGSSNKEH PIACMNACQK FGLPEFCCYG 201: EYGKPAKCQP TLYSTNFKNE CPLAYSYAYD NENNTFRCSN SPNYVITFCP NDISSMSQPS KETNGGTKQK SSWKLKLIVG VSAALTLMIL IVVVIIVRTK 301: NMRNSEWNDQ NVEAVAMLKR YSYTRVKKMT NSFAHVLGKG GFGTVYKGKL ADSGRDVAVK ILKVSEGNGE EFINEVASMS RTSHVNIVSL LGFCYEKNKR 401: AIIYEFMPNG SLDKYISANM STKMEWERLY DVAVGISRGL EYLHNRCVTR IVHFDIKPQN ILMDENLCPK ISDFGLAKLC KNKESIISML HMRGTFGYIA 501: PEMFSKNFGA VSHKSDVYSY GMVVLEMIGA KNIEKVEYSG SNNGSMYFPE WVYKDFEKGE ITRIFGDSIT DEEEKIAKKL VLVALWCIQM NPSDRPPMIK 601: VIEMLEGNLE ALQVPPNPLL FSPEETVPDT LEDSDDTSTF FNPSHFERGT LLDSEDVLQH GSRSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)