AT5G24970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10001 Blast hits to 9972 proteins in 1791 species: Archae - 126; Bacteria - 4383; Metazoa - 406; Fungi - 470; Plants - 723; Viruses - 14; Other Eukaryotes - 3879 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:8604358..8608663 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81200.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.64 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||
| Length | 719 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRNAVVALRH HRRVSLLRRI VAFRDDNTIC LSPSLKNNEL SRQTNSWVSP FCLQRRAYST GFTSVHGGIP TAEYAKLRRE SLETEFGHAL GAYSSKSFSA 101: VYRFGPFLAL YRAAIISYHV VKLAFWQLFV QDMRKRAVKF RETLISLGPF YIKALSTRPD ILPSIYCQEL SKLQDQIPPF PTTVAMRCIE EQLGAPVSKL 201: FADISLKPVA AASLGQVYKA HLHSGQLVAV KVQRPGMSLI LTRDALLFKM IGGQLKRFAK ARKDLLVAVN EMVRHMFDEI DYVLEAKNAE RFASLYSFDS 301: GNEQIDDNAG PRNMSRNHRA ENIKVPKIYW NFTRTAVLTM EWIDGIKLTD EIKLKRASLD RRDLIDQGLS CSLKQLLEVG FFHADPHPGN LVATKEGSLV 401: YFDFGMMGNI PRHYRVGLIQ ILVHFVNRDS LSLANDFLSL GFLPEGVDIQ AVSNALRTSF GSTTRISQDF QGVMEQLYDV MYEFNFSLPP DYALVIRSLG 501: SLEGTAKILD PEFKVIESAY PFVIGRLLAD PSPDMRKILR ELVICNDGSI RWNRLERLVA AISEQASATS GDSPEDKTLK KSSELKSFDM HSVVSATEDL 601: LLFILSEKGQ RVRVFLLQDI IRVVDIFLEV EALELNKTIN LKTEEGTMKR VSNGFKGLSE AVKLAPGMWI SMLLRMSRKS EVHSYALDIV SALSTHFGHK 701: VPHTCWILLS KLLHHNKSQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)