AT5G22640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
embryo defective 1211 (emb1211); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7529423..7533641 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99958.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.09 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.88 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 871 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANEELTESQ QQEDPSQQLP NADEEKGSDS DSNSDSDASS QSSGDDFYIS ESENEAEGDN TIFNYVRPSD IPPDPNANPE TNIRRFNRVL DGKRVKRMQE 101: EEEDKYTFYE DLFDFPRDPE RWKEQDLREI WADGPLEMTK PGWDPAWADE DDWDVVNDEI QEGRDPGIQP FYVPYRKPYP AIPDNHYDIE NAKGVVEELD 201: RIEEFLQWVS YIFPDGSSYE GTVWDDLAQG KGVYIAENGL VRYEGEWLQN DMEGHGVIDV DIPDIEPIPG SKLEAKMRAE GRIIKRDYMT PEDRKWLEMD 301: VEDSVALTDG NFQVPFYENE EWVTQFGEKP EKGRYRYAGQ WKHSRMHGCG VYEVNERILY GRFYFGELLE EEHGCTVDIC ALHSGLAEVA AAKARMFVNK 401: PDGMIREERG PYGDPQHPYF YEEDDVWMAP GFINQFYEVP EYWETYVGEV DQEREMWLNS FYKAPLRLPM PAELEHWWEN VEVTPEFVLL NKEPEPDPND 501: PSKLVQKEDP VILHTPTGRI INYVEDEKHG IRLFWQPPLE EGEEVDPSKV EFLPLGFDEF YGKEVVVKKE HPIKSFVLGI EKSVKPMLDG LEKWTEEKKK 601: AYEERKEMIQ QELELVEAEI CLEEAIEDMD EELKKKEQEE EKKTEMGLTE EDEDVLVPVY KEEKVVTAKE KIQENKQEEK YKDDDDEDDD DGDDDDDDDD 701: DDDLGPSSFG SADKGRRNSP FSSSSLSFAS CTLFPAVQSR LESSFLAWKQ HRAEPSKVNT GIIKGADTAS ASIHFPPLSS NNARLKMGKV ANRGCVQRSY 801: GSSRSQSQLM SLSRLLSCNA SSSSSPPDSS SSEYLKDSGL WETPVGDMSV VLSLQIQTKC SDLFAETPAV S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)