AT5G22050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G19300.1); Has 21363 Blast hits to 21123 proteins in 346 species: Archae - 0; Bacteria - 18; Metazoa - 821; Fungi - 4; Plants - 20178; Viruses - 12; Other Eukaryotes - 330 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:7301467..7303209 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34484.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.01 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||
| Length | 299 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDDRLRLSRR IRFLLLAWLR RSRSGRIEFI RRFGYKEIIK ATEGFRKVIY TNYHGSAYRA KFKGGEVALV KELTALDLGR ERFDEEVQLL GRLRHRHLLT 101: LRGFCIGRKR LLVFDNIENG SLKEHLNDPL KTPLNWKTRI QIAIGVAAAL EYLLVFSSND AQIYDVSVNS CNIMLDENFT PKISASTDIQ KTIRKQPMIL 201: VLKECGNVIF QLGVLMLELI TGQSSDRQGN DLIEWVQDSC IANSIDKMID PDLGNNYSSR ELQKVLAVAR LCIKTRYEPP SFSITHVYRY LQKKIDVAT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)