AT5G15140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Galactose mutarotase-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: aldose 1-epimerase activity; INVOLVED IN: galactose metabolic process, hexose metabolic process, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Aldose 1-epimerase, subgroup (InterPro:IPR015443), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G01260.1); Has 86054 Blast hits to 36023 proteins in 2379 species: Archae - 275; Bacteria - 25650; Metazoa - 19137; Fungi - 9557; Plants - 4507; Viruses - 809; Other Eukaryotes - 26119 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:4908686..4910670 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54522.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.34 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.97 | ||||||||||||||||||||||||||||||||||||||||
| Length | 490 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MARSSVLLCL ILLVTLGVVI SVTFADNVEL KSKDLESSKK DKKVDHDSTH KEKGGEKVDG AGSDDEDNDK KEKKKEHDVQ KKDKQHENKD KDDEKKHVDK 101: KKSGGHDKDD DDEKKHKDKK KDGHNDDDDS DDDTDDDDDD DDDDDDDDEV DGDDNEKEKI GLYELKKGNL TVKFTNWGAS IISLHFPDKN GKMDDIVLGY 201: DSVKTYKTDK VYFGATVGRV ANRIGKGKFK LNGKEYKTSV NDGKNTLHGG KKGFGDVVWA VAKHQYDGKK PHIVFTHTSP DGDQGFPGEL SVTVTYKLVK 301: DNELSVVMEA KPKDKATPVN LAHHSYWNLG GHNSGDILSE EIQILGSGYT PVDGELIPTG KINPVKGTAY DFLQLRPIKD NMKDLKTGYD INYCLDGKAK 401: KMRKIVELVD KKSGRKMELS GNQAGLQFYT GGMLKDVKGK NGAVYQAFGG LCLETQSYPD ALNHPKFPSQ IVEPGKKYKH TMLFKFSIVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)