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AT5G02090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.514
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:831871EMBL:AK118214EMBL:AL162508EMBL:BT005481
EMBL:CP002688EnsemblPlants:AT5G02090EnsemblPlants:AT5G02090.1entrez:831871
GeneID:831871Gramene:AT5G02090.1hmmpanther:PTHR34670hmmpanther:PTHR34670:SF3
HOGENOM:HOG000077432KEGG:ath:AT5G02090OMA:IVMYKREPhylomeDB:Q9LZM2
PIR:T48230Proteomes:UP000006548RefSeq:NP_195829.1TAIR:AT5G02090
UniGene:At.33463UniProt:Q9LZM2
Coordinates (TAIR10) chr5:-:412350..412607
Molecular Weight (calculated) 9641.46 Da
IEP (calculated) 10.79
GRAVY (calculated) -0.58
Length 85 amino acids
Sequence (TAIR10)
(BLAST)
1: MEGLIPFLYK AIVMYKREGS FSSVLLSDHH SPSNAGYYMR LPGDSSSRFR TSDLRRFGTD RFGMLETTPS SSPSRVSTRN ITKRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)