AT4G38950.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP binding microtubule motor family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based process, microtubule-based movement; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT2G21300.2); Has 9938 Blast hits to 9516 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 4372; Fungi - 1331; Plants - 1857; Viruses - 0; Other Eukaryotes - 2378 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:18154606..18158461 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94469.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.49 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.59 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 836 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKTQMPVAR EEKILVLVRL RPLNQKEIAA NEAADWECIN DTTILYRNTL REGSNFPSAY SFDKVYRGEC PTRQVYEDGT KEIALSVVKG INCSIFAYGQ 101: TSSGKTYTMT GITEFAVADI FDYIFQHEER AFSVKFSAIE IYNEAIRDLL SSDGTSLRLR DDPEKGTVVE KATEETLRDW NHLKELLSIC EAQRKIGETS 201: LNERSSRSHQ MIRLTVESSA REFLGKENST TLMASVNFID LAGSERASQA MSAGTRLKEG CHINRSLLTL GTVIRKLSKG RQGHINFRDS KLTRILQPCL 301: GGNARTAIIC TLSPARSHVE LTKNTLLFAC CAKEVTTKAR INVVMSDKAL LKQLQRELAR LETELRNPAS SPASNCDCAM TVRKKDLQIQ KMEKEIAELR 401: KQRDLAQSRL EDFMRMIEHN VASKPGTPHF GNHTDKWEDG SVSETSGVVD SDRRSFISDG MSTPLSISRA YVHSHSDDDD LDEDLPRRSE DLSEEYCREV 501: QCIETEESVT VYNNKKDKRA EPENVLGCGE DANGETSVSQ NVRVRSWNRR ETVSGPSTPP ENIGTGFLGR PESHKIAFPD LEFGSTVSRN DSMSSCGSDS 601: TGTQSIRTPL GEEGGITSIR TFVEGLKEMA KRQGEVSNAE DSGKMRRDIG LDSMDREFER QRQEILELWQ TCNISLVHRT YFYLLFKGDE ADSIYIGVEL 701: RRLLFMKDSF SQGNQALEGG ETLTLASSRK ELHRERKMLS KLVGKRFSGE ERKRIYHKFG IAINSKRRRL QLVNELWSNP KDMTQVMESA DVVAKLVRFA 801: EQGRAMKEMF GLTFTPPSFL TTRRSHSWRK SMPALF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)