AT4G35510.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits to 179 proteins in 73 species: Archae - 0; Bacteria - 87; Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:16860712..16861713 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 35967.20 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.82 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.72 | ||||||||||||||||||||||||
| Length | 333 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METNPCDMNQ LDSDSHLPPR KRLLAGFKKF NSNGINGSSP SDFASSSSTS NSNGSSSAST NVQTHLGNLL SSPFNNDQSP EELVEATRSA AALAVKAAKA 101: ARAIANEKAL ISAKAIAAAK RALELVDSFP KEAMADCKER SPRKNKQKKH VPVELLYSKG QLRDEEDDLA RRLHRAIDNT SYPRVLRTSE ENGQRYKKQK 201: KNKSVVEGGS SSIIVTGSMK DIAGVVDSDS SYEGLEIARS NRDEADSMLM MEKSGEESNS LVKRRGRVKL KKLPLSICNS RNQENGTSSA SPLPVAQPQE 301: DGGAITVIAG SSSWKCQDIK APECVKQNKA VRS |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)