AT4G30350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G57710.1); Has 16030 Blast hits to 14793 proteins in 2754 species: Archae - 27; Bacteria - 12697; Metazoa - 12; Fungi - 280; Plants - 607; Viruses - 0; Other Eukaryotes - 2407 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:14848031..14850973 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 101401.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.63 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||
| Length | 924 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRADLITIQQ TLTPEAATVL NQSIAEATRR NHGHTTPLHV AATLLSSSSG YLRQACIKSH PNSSHPLQCR ALELCFSVAL ERLPTTSTTT TTTSSSSSSS 101: PSQTQEPLLS NALTAALKRA QAHQRRGCPE QQQQPLLAVK VELEQLIISI LDDPSVSRVM REASFSSPAV KSAIEQSLIG NSVSNSRQTG SPGIINPSAI 201: GFGYRSVPAP VNRNLYLNPR LQQPGVGMQS GMMIQRTDEA KRVIEIMIRT RKRNPVLVGD SEPHILVKEI LEKIENGEFS DGALRNFQVI RLEKELVSQL 301: ATRLGEISGL VETRIGGGGV VLDLGDLKWL VEHPAANGGA VVEMRKLLER YKGRLCFIGT ATCETYLRCQ VYYPSMENDW DLQAIPIAAK SSLPAIFPRL 401: GSNNNNNAML LSNNIISIES ISPTRSFQIP MSKMSCCSRC LQSYENDVAK VEKDLTGDNR SVLPQWLQNA KANDDGDKKL TKDQQIVELQ KKWNDLCLRL 501: HPNQSVSERI APSTLSMMKI NTRSDITPPG SPVGTDLVLG RPNRGLSSPE KKTREARFGK LGDSFDIDLF KKLLKGLAKS VWWQHDAASS VAAAITECKH 601: GNGKSKGDIW LMFTGPDRAG KSKMASALSD LVSGSQPITI SLGSSSRMDD GLNIRGKTAL DRFAEAVRRN PFAVIVLEDI DEADILLRNN VKIAIERGRI 701: CDSYGREVSL GNVIIILTAN SSLGSAKNVA SIDETRLESL VNKGWELRLS VCNSSKTRKR KPNWLYSDND QTKQRKEICF DLNEAAEFDS SSDVTVEHDQ 801: EDNGNLVHKL VGLVDDAILF RPVDFDSIKS KTAESLKKRF SNGLADGLTV EIEDDALERI AGAIWLSKIS LEEWLEEAMG SSLNSVKSRV SSSEDSVIRI 901: ELEDDLNDRI SGGYLPSSIR TVVV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)