AT4G23210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 13 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 13 (CRK13); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response to bacterium, response to molecule of bacterial origin, plant-type hypersensitive response; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 22 (TAIR:AT4G23300.1); Has 114660 Blast hits to 113447 proteins in 4374 species: Archae - 92; Bacteria - 13215; Metazoa - 42360; Fungi - 9577; Plants - 32731; Viruses - 419; Other Eukaryotes - 16266 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:12149154..12151418 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68205.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.87 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||
| Length | 610 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKQRSLLSIL CFILLASGVA SVSAQTCIEN RKYFTPNGTY DSNRRLILSS LPNNTASRDG FYYGSIGEEQ DRVYALGMCI PKSTPSDCSN CIKGAAGWLI 101: QDCVNQTDAY YWALDPTLCL VRYSNISFSG SAAFWEIEPQ YLVLNTATIA SNLTEFKTIW EDLTSRTITA ASAARSTPSS SDNHYRVDFA NLTKFQNIYA 201: LMQCTPDISS DECNNCLQRG VLEYQSCCGN NTGGYVMRPI CFFRWQLFTF SKAFHNITLA TTPPLSPPPL QRPVVASQPP SADNRDKKRD NSSGKISMKT 301: ILAIVVVGIV ILIIISGILA RRFARKEKPY QEVELNQTGI TSVRSLQYKF KTIETATNNF SERLGHGGSG HVFKGRLPDG KEIAVKRLSE KTEQSKKEFK 401: NEVVLVAKLQ HRNLVRLLGF SVKGEEKIIV YEYLPNRSLD YILFDPTKQG ELDWKKRYKI IGGTARGILY LHQDSQPTII HRDLKAGNIL LDAHMNPKVA 501: DFGTARIFGM DQSVAITANA AGTPGYMAPE YMELGEFSMK SDVYSYGVLV LEIICGKRNT SFSSPVQNFV TYVSTIIVSH CCCNCKIWIR SLNFVSGLEV 601: MEKRDTIKPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)