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AT4G15735.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28003327 (2017): extracellular region apoplast
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : SCR-like 10
Curator
Summary (TAIR10)
Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).
Computational
Description (TAIR10)
SCR-like 10 (SCRL10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility response (InterPro:IPR010682); BEST Arabidopsis thaliana protein match is: SCR-like 9 (TAIR:AT2G05117.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioGrid:30318EMBL:AK221079EMBL:AL161542EMBL:BT014951
EMBL:BT015385EMBL:CP002687EMBL:Z97339EnsemblPlants:AT4G15735
EnsemblPlants:AT4G15735.1entrez:2745709GeneID:2745709GO:GO:0005576
GO:GO:0007165GO:GO:0031640GO:GO:0050832Gramene:AT4G15735.1
HOGENOM:HOG000006490IntAct:P82629InterPro:IPR010682KEGG:ath:AT4G15735
OMA:SASEMPKPaxDb:P82629Pfam:P82629Pfam:PF06876
PhylomeDB:P82629PRO:PR:P82629ProteinModelPortal:P82629Proteomes:UP000006548
RefSeq:NP_974556.1TAIR:AT4G15735tair10-symbols:SCRL10UniGene:At.49726
UniProt:P82629
Coordinates (TAIR10) chr4:+:8963085..8963515
Molecular Weight (calculated) 11909.40 Da
IEP (calculated) 7.54
GRAVY (calculated) -0.18
Length 107 amino acids
Sequence (TAIR10)
(BLAST)
001: MKVVAIFLAS CVLFSLIPTH LSHEEPKVAP TEELMFAPSN QPRYCRSRQV FDGSCTDRGT PRTTCFLDFL GARSASEMPK NCDCTPQPNN KRLCECSVIC
101: TDCCVKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)