AT4G15396.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.995 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : cytochrome P450, family 702, subfamily A, polypeptide 6 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
a member of the cytochrome P450 family. molecular function unknown. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 702, subfamily A, polypeptide 6 (CYP702A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 702, subfamily A, polypeptide 5 (TAIR:AT4G15393.2); Has 23362 Blast hits to 23314 proteins in 1367 species: Archae - 48; Bacteria - 2759; Metazoa - 9973; Fungi - 3685; Plants - 6080; Viruses - 3; Other Eukaryotes - 814 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:+:8807574..8810419 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54475.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.78 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 475 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVDLYEFWAV IVSLIVVKLC HSIYQWRNPK SNGELPPGSM GYPIIGETFE FMKPHDAIQL PTFVKEKVLR HGPVFRTSLF GGKVIISTDI GLNMEIAKTN 101: HIPGMPKSLA RLFGANNLFV NKDTHKHARS LTNQFLGSQA LKLRMLQDID FLVRTHLKEG ARKGSLDIKE TTSKIIIECL AKKVMGEMEP DAAKELTLCW 201: TFFPREWFGF AWNIPGTGVY RMVKARNRMM KVLKETVLKK RASGEELGDF FKTIFGDTER GVKTISLESA TEYIFTLFLL ANETTPAVLA ATIKLISDHP 301: KVMQELQREH EGIVRDKIEK NEKADLTWED YKSMTFTQMV INESLRITST VPTVLRIIDH EFQFGEYTIP AGWIFMGYPY VHFNAEKYDD PLAFNPWRWK 401: GKDLSAIVSR TYIPFGSGSR LCVGAEFVKL KMAIFIHHLS RYRWSMKTET TLLRRFVLIL PRGSDVQILE DTKAK |
||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)