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AT4G13235.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : embryo sac development arrest 21
Curator
Summary (TAIR10)
Encodes a defensin-like (DEFL) family protein.
Computational
Description (TAIR10)
embryo sac development arrest 21 (EDA21); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo sac development; LOCATED IN: endomembrane system; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AK221753EMBL:AL049751EMBL:AL161535EMBL:CP002687
EnsemblPlants:AT4G13235EnsemblPlants:AT4G13235.1entrez:826940GeneID:826940
Genevisible:Q56XC2GO:GO:0005576GO:GO:0031640GO:GO:0050832
Gramene:AT4G13235.1InParanoid:Q56XC2KEGG:ath:AT4G13235Pfam:Q56XC2
PIR:T07703PRO:PR:Q56XC2Proteomes:UP000006548RefSeq:NP_567399.3
TAIR:AT4G13235tair10-symbols:EDA21TMHMM:TMhelixUniGene:At.54298
UniProt:Q56XC2
Coordinates (TAIR10) chr4:-:7677866..7678247
Molecular Weight (calculated) 10060.40 Da
IEP (calculated) 9.05
GRAVY (calculated) 0.13
Length 91 amino acids
Sequence (TAIR10)
(BLAST)
1: MAVKLIYLFL FLYIALLISE GMATTPGRTM STTAGRRDGK SGRTEWLYVA GECAKLPRCN KYCVSNGFHL GGFCEKLSPQ ASYLSCVCKY T
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)