AT4G10620.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:+:6564297..6566402 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 66494.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.83 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||
| Length | 597 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLSKAARELS SSKLKPLFAL HLSSFKSSIP TKPNPSPPSY LNPHHFNNIS KPPFLRFYSS SSSSNLLPLN RDGNYNDTTS ITISVCPGCG VHMQNSNPKH 101: PGFFIKPSTE KQRNDLNLRD LTPISQEPEF IDSIKRGFII EPISSSDLNP RDDEPSDSRP LVCARCHSLR HYGRVKDPTV ENLLPDFDFD HTVGRRLGSA 201: SGARTVVLMV VDASDFDGSF PKRVAKLVSR TIDENNMAWK EGKSGNVPRV VVVVTKIDLL PSSLSPNRFE QWVRLRAREG GLSKITKLHF VSPVKNWGIK 301: DLVEDVAAMA GKRGHVWAVG SQNAGKSTLI NAVGKVVGGK VWHLTEAPVP GTTLGIIRIE GVLPFEAKLF DTPGLLNPHQ ITTRLTREEQ RLVHISKELK 401: PRTYRIKEGY TVHIGGLMRL DIDEASVDSL YVTVWASPYV PLHMGKKENA YKTLEDHFGC RLQPPIGEKR VEELGKWVRK EFRVSGTSWD TSSVDIAVSG 501: LGWFALGLKG DAILGVWTHE GIDVFCRDSL LPQRAHTFED SGFTVSKIVA KADRNFNQIH KEETQKKRKP NKSFSDSVSD RDNSREVSQP SDILPTM |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)