AT4G06744.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 ASURE: extracellular What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat (LRR) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat (LRR) family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19320.1); Has 45026 Blast hits to 12967 proteins in 516 species: Archae - 11; Bacteria - 711; Metazoa - 1155; Fungi - 115; Plants - 40928; Viruses - 0; Other Eukaryotes - 2106 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:4070870..4072084 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44621.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.50 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.16 | ||||||||||||||||||||||||||||||||||||
| Length | 404 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMNHLLLALF LVGTIALPDR GTQQLTNDGL TGARREILSF LDQRLAVVYP VIQRFKSLIT LDPYNVTKTW IGSDICSYRG FHCDNPPHNK TAVTVASIDF 101: NGFQLSAPSI EGFIDQFADL ALFHVNSNNF GGTVPSKIVN LRYLYELDIS NNRFTGQFPT AVVGMSGLTF IDIRFNSFSG SIPPQILGQN LEVLFINDNG 201: FTASLPEIPG DGTTHILFLT LANNKFNGPL PRSILRSMST LTEVLFLNND FTGCIPHEIG FLTGASVIDI GGNKLTGPLP LSLMCLEKVE QLNFAGNLLF 301: GAVPEAVCML LRDNLVNLSL SDNYFTHVGP WCRGLLEKGV LDVGNNCIPF FPGQRSMQEC AEFFVKPKKY YCPHMWFHSF FSCRYSHISS SSSSAFMPMV 401: APSP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)