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AT3G62640.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.882
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF3511)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF3511); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3511 (InterPro:IPR021899); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3511) (TAIR:AT2G47480.1); Has 218 Blast hits to 218 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 218; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J3DTeggNOG:ENOG410ZGXUEMBL:AK118599EMBL:AL162651
EMBL:BT004692EMBL:CP002686EnsemblPlants:AT3G62640EnsemblPlants:AT3G62640.1
entrez:825438GeneID:825438Gramene:AT3G62640.1hmmpanther:PTHR33193
hmmpanther:PTHR33193:SF1InterPro:IPR021899KEGG:ath:AT3G62640OMA:KDRYSHI
Pfam:PF12023PhylomeDB:Q9LZK1PIR:T48053Proteomes:UP000006548
RefSeq:NP_191823.1TAIR:AT3G62640UniGene:At.34081UniProt:Q9LZK1
Coordinates (TAIR10) chr3:-:23166511..23166843
Molecular Weight (calculated) 12318.70 Da
IEP (calculated) 10.77
GRAVY (calculated) -0.79
Length 110 amino acids
Sequence (TAIR10)
(BLAST)
001: MDGFGSHPRT LAVDQWMDIV NGKGYGVGGT TQVYSTRPDS PKFQPSIPPP PGSTSKTRTT ATPWRLIDAE TKRKKRIATY KTYALEGKVK STVKKGFHWI
101: KDRYSHIIHG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)