AT3G61680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 210 Blast hits to 205 proteins in 59 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 31; Plants - 122; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22824630..22826926 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71739.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.09 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||
| Length | 649 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFNTAMAST SPAAANDVLR EHIGLRRSLS GQDLVLKGGG IRRSSSDNHL CCRSGNNNNR ILAVSVRPGM KTSRSVGVFS FQISSSIIPS PIKTLLFETD 101: TSQDEQESDE IEIETEPNLD GAKKANWVER LLEIRRQWKR EQKTESGNSD VAEESVDVTC GCEEEEGCIA NYGSVNGDWG RESFSRLLVK VSWSEAKKLS 201: QLAYLCNLAY TIPEIKGEDL RRNYGLKFVT SSLEKKAKAA ILREKLEQDP THVPVITSPD LESEKQSQRS ASSSASAYKI AASAASYIHS CKEYDLSEPI 301: YKSAAAAQAA ASTMTAVVAA GEEEKLEAAR ELQSLQSSPC EWFVCDDPNT YTRCFVIQGS DSLASWKANL FFEPTKFEDT DVLVHRGIYE AAKGIYEQFL 401: PEITEHLSRH GDRAKFQFTG HSLGGSLSLI VNLMLISRGL VSSEAMKSVV TFGSPFVFCG GEKILAELGL DESHVHCVMM HRDIVPRAFS CNYPDHVALV 501: LKRLNGSFRT HPCLNKNKLL YSPMGKVYIL QPSESVSPTH PWLPPGNALY ILENSNEGYS PTALRAFLNR PHPLETLSQR AAYGSEGSVL RDHDSKNYVK 601: AVNGVLRQHT KLIVRKARIQ RRSVWPVLTS AGRGLNESLT TAEEIMTRV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)