AT3G58650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2350 Blast hits to 1412 proteins in 248 species: Archae - 0; Bacteria - 487; Metazoa - 577; Fungi - 236; Plants - 184; Viruses - 4; Other Eukaryotes - 862 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21696349..21699219 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 91151.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.45 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||||||
| Length | 820 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVVERKRPR GAFLNLFDWH GKSRKKLFSS NLSQLSEESK QAKENVQNPS ITPHSVFEVD QSVKNPTYNP RSDSSCCASS VTSDDGNVVR ASVVARLMGL 101: EGLPLPNVLE PRVNPDLDPY FLRSSRQANT WDANVDRQSD FDGVSWDHLD SRTSKGPRKR MIERFQTETL PPRSAKPISV THNKLLSPIR NPGFVPSRNP 201: AYVMEAASRM IEQSPRMIAR TRMVSSSDSS SPVPLRIRDL KEKLEAAQKA STSVPQISND TRNSRYLRGD QNEKKTTVLG KNSYDALKGG EVKPPSFAAQ 301: AKVSSNQKQD SLSMSSSGNK RMSSGQKEKV EAKNRAVKSQ NSSKGSSLST GKNVLRQNNQ KQNCRDNQQS RRVMNKVVNK VLVESGSISK SSGFTMSSAE 401: KPTSLPLSRK KSLPRSKKPR NGVQESGIYE DKRIKRGEKS IKCNISIDGD SSTSKDDQKR DMDVISFTFS SSIKGLSSPH SQGTKQDADS AIRFNVIGGD 501: SLNALLEQKL RELTTKIESS SSSLIQEEPL SSISKDRANA MISSPSKYSG LTQSSLDRVL TESESVSDCT SFFNSQKVQK QKVIQGEEQE VSSITTLTEA 601: DDFALSCSKS ISDCRHDREY GMKQSSSDQE LTWGSSNESQ HTLDETESAT LDWELEYITE ILNSGQLMFQ DFASGTTTNE SLLPSSLFDE MERSRGAATS 701: MKTERKALFD CVNQCLAVKF ERMLIGSCKG MMMSGGILLE HRDLLAEEVN REVKGLKKMR EMMIDELVDH DMSCFEGRWI GYEREMFEEG IDMEGEIVSA 801: LVDDLVSDIL STSVLKRSLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)