AT3G57460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.961 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : catalytics;metal ion binding | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
catalytics;metal ion binding; FUNCTIONS IN: catalytic activity, metal ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249); BEST Arabidopsis thaliana protein match is: Insulinase (Peptidase family M16) family protein (TAIR:AT3G57470.1); Has 1493 Blast hits to 898 proteins in 288 species: Archae - 0; Bacteria - 451; Metazoa - 456; Fungi - 242; Plants - 223; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21263086..21265797 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40332.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.05 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||
| Length | 356 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIENAAAAS GECGVILKAR TDKREYRRIV LKNSLEVLVK AVPIKQGHNL TVSWPVTPSI HHYEEAHARW ATGLYAGEPD WTVEYSFFNV SINLTDACHE 101: HMKDILGLLF RQIKLLQQSG VSQWIFDELS AIFEAEFHYQ AKIDPISYAV NISSNMTNLL GIKYEGQTDK VEPWYNTAEK IIKFTIQMDF NCPLAVSSPA 201: TVVLSNSSVW LLVDYLNEYA YYAQAARLHY GLSLSDNGFE LSLTGFNHKL RILLEAVIQK MANFQVKPDR FSVVKVTVLR ELKKEELINF FDEYTKVGAP 301: KRKSLSVCVY GNQHLKEMSS DKDKVVSTSI EIEDIVGFRN SQPLYASLKG CSQLKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)