AT3G47580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.809 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 205192 Blast hits to 128567 proteins in 4736 species: Archae - 173; Bacteria - 19530; Metazoa - 65101; Fungi - 9747; Plants - 86373; Viruses - 300; Other Eukaryotes - 23968 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:17532687..17535810 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 111260.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.24 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1011 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MKLFLLLSFS AHLLLGADGF TDETDRQALL EFKSQVSEGK RDVLSSWNNS FPLCNWKWVT CGRKHKRVTH LNLGGLQLGG IVSPSIGNVS FLISLDLSDN 0101: AFGGIIPREV GNLFRLEHLY MAFNSLEGGI PATLSNCSRL LNLDLYSNPL RQGVPSELGS LTKLVILDLG RNNLKGKLPR SLGNLTSLKS LGFTDNNIEG 0201: EVPDELARLS QMVGLGLSMN KFFGVFPPAI YNLSALEDLF LFGSGFSGSL KPDFGNLLPN IRELNLGEND LVGAIPTTLS NISTLQKFGI NKNMMTGGIY 0301: PNFGKVPSLQ YLDLSENPLG SYTFGDLEFI DSLTNCTHLQ LLSVGYTRLG GALPTSIANM STELISLNLI GNHFFGSIPQ DIGNLIGLQR LQLGKNMLTG 0401: PLPTSLGKLL RLGLLSLYSN RMSGEIPSFI GNLTQLEILY LSNNSFEGIV PPSLGKCSHM LDLRIGYNKL NGTIPKEIMQ IPTLVNLSME GNSLSGSLPN 0501: DIGSLQNLVK LSLENNKFSG HLPQTLGNCL AMEQLFLQGN SFDGAIPNIR GLMGVRRVDL SNNDLSGSIP EYFANFSKLE YLNLSINNFT GKVPSKGNFQ 0601: NSTIVFVFGN KNLCGGIKDL KLKPCLAQEP PVETKHSSHL KKVAILVSIG IALLLLLVIA SMVLCWFRKR RKNQQTNNLV PSKLEIFHEK ISYGDLRNAT 0701: NGFSSSNMVG SGSFGTVFKA LLPTESKIVA VKVLNMQRRG AMKSFMAECE SLKDTRHRNL VKLLTACAST DFQGNEFRAL IYEYLPNGSV DMWLHPEEVE 0801: EIRRPPRTLT LLERLNIVID VASVLDYLHV HCHEPIAHCD LKPSNVLLED DLTAHVSDFG LARLLLKFDK ESFLNQLSSA GVRGTIGYAA PEYGMGGQPS 0901: IHGDVYSFGV LLLEMFTGKR PTDELFGGNL TLHSYTKLAL PEKVFEIADK AILHIGLRVG FRTAECLTLV LEVGLRCCEE YPTNRLATSE VAKELISIRE 1001: RFFKTRRTPR R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)