AT3G46920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1); Has 114688 Blast hits to 113328 proteins in 4810 species: Archae - 114; Bacteria - 11620; Metazoa - 44899; Fungi - 9603; Plants - 31346; Viruses - 418; Other Eukaryotes - 16688 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:17280430..17284857 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 129018.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.81 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1171 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MAHEPSSPSS NLVSNPANLS ASGLDYSSDL SNKRVSDGII SGFGSEQVSI DATNRNNPNL GNKRSDMDDE ELEKVKFLCS YNGKIIPRPS DGMLRYVGGQ 0101: TRIVSVKKNV RFDEFEQKMI QVYGHPVVVK YQLPDEDLDA LVSVSSSEDI DNMMEEFEKL VERSSDGSGK LRVFLFDASS SEVDDSFGIL EYGDGVDIGQ 0201: RYVEAVNGVV VSKESVASGS SNPNSDFSGV DVVDSLGVGQ SDFVATTWTS SNFSPQTYHS NVSRLVPPDP RSSAYVVPMT VHADPPHSFQ LETVSEKPIV 0301: GKMQQQQQGY TTPSEHHPPA YVESRQEALR QPDIVHSPIQ LLPSSTSLFS QQPFQDSPLS VSSHQFLPAA HMSMAPLNSQ ISSTPVLINP VMQTQENLLG 0401: NYHAAQKLVP LPTEPRNTAY QGTISPGIPF DGYGGSQVPP SNHVVLPDGS FYQQVTMAES FQRVNDCHMC QTSFPHMHSD PIMREGNDGS TMYVPYVSSA 0501: FYASRPDDIM RIQQTDKFTG QQSFLNHSNH QERDTLHNAN LATAQVETTE PFVNEIVRDV PIKVQVTRQQ QHPVDPSVAY AQCRELSGLV DNVNIHAPEI 0601: YSNCQNFISP VDKIGKEDIM GTSSQQMARK NMFLHDTSGQ SPVSPNIDHT DSAKRLTRVV LPGHESQPKE SCVPTQSPLL GNPGLYLQSL VGGQQFDSAE 0701: AQSSNPAYDV VESTFDAANL PSSLSSNPDA ANLPSSLSSS VGGADHKESS KSLFSNQDPW NLQTNSNEDV KPDLLNSSKV ILENDLLIGL WFSLKGSEEE 0801: HIKQELQNVA EGVAASVLQS STPSYHEPPI KVDEYAFNSK GEVSRNDEMK QQSTHFKDIR NQLLERLNFG YSGSDSLDQL QIIKDSDLEE LRELGSGTFG 0901: TVYHGKWRGT DVAIKRINDR CFAGKPSEQE RMIDDFWNEA QNLAGLHHPN VVAFYGVVLD SPGGSVATVT EYMVNGSLRN ALQKNVRNFD RCKRQLIAMD 1001: IAFGMEYLHG KKIVHFDLKS DNLLVNLRDP HRPICKVGDL GLSKVKCQTL ISGGVRGTLP WMAPELLNGT SSLVSEKVDV FSFGIVLWEL FTGEEPYADL 1101: HYGAIIGGIV SNTLRPQIPD FCDMDWKLLM ERCWSAEPSE RPSFTEIVNE LRTMATKLPS KEQGSTQGPQ S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)