AT3G27660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 ASURE: vacuole What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : oleosin 4 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
oleosin 4 (OLEO4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to freezing, lipid storage, seed germination, seed oilbody biogenesis; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; EXPRESSED IN: hypocotyl, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: oleosin 2 (TAIR:AT5G40420.1); Has 520 Blast hits to 520 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:10243851..10244821 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 20314.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.81 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 191 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANVDRDRRV HVDRTDKRVH QPNYEDDVGF GGYGGYGAGS DYKSRGPSTN QILALIAGVP IGGTLLTLAG LTLAGSVIGL LVSIPLFLLF SPVIVPAALT 101: IGLAVTGILA SGLFGLTGLS SVSWVLNYLR GTSDTVPEQL DYAKRRMADA VGYAGMKGKE MGQYVQDKAH EARETEFMTE THEPGKARRG S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)